Publications
- Singh, J, et al.,. Single-arm, open-labelled, safety and tolerability of intrabronchial and nebulised bacteriophage treatment in children with cystic fibrosis and Pseudomonas aeruginosaBMJ Open Respiratory Research 2023; 10(1):e001360
DOI: 10.1136/bmjresp-2022-001360 · [Download PDF]
- Lee, LYY, et al.,. Quantifying the reduction of airborne infectious virus load using a ventilated patient hoodJournal of Hospital Infection 2023;
DOI: 10.1016/j.jhin.2023.04.009 · [Download PDF]
- Bichet, MC, et al.,. Mammalian cells internalize bacteriophages and utilize them as a food source to enhance cellular growth and survivalbioRxiv 2023;
DOI: 10.1101/2023.03.10.532157 · [Download PDF]
- Ang, B, et al.,. Bacterial concentration and detection using an ultrasonic nanosieve within a microfluidic device Sensors and Actuators 2023; 374:132769
DOI: 10.1016/j.snb.2022.132769 · [Download PDF]
- Chin, WH, et al.,. Bacteriophages evolve enhanced persistence to a mucosal surfaceProc. Natl. Acad. Sci. 2022; 119(27):e2116197119
DOI: 10.1073/pnas.211619711 · [Download PDF]
- Wang, Y, et al.,. Phage Cocktail Targeting STEC O157: H7 Has Comparable Efficacy and Superior Recovery Compared with Enrofloxacin in an Enteric Murine ModelMicrobiology Spectrum 2022; 10(3):e00232-22
DOI: 10.1128/spectrum.00232-22 · [Download PDF]
- Landry, SA, et al.,. Point of emission air filtration enhances protection of healthcare workers against skin contamination with virus aerosolRespirology 2022; 27(6):465
DOI: 10.1111/resp.14227 · [Download PDF]
- Gordillo Altamirano, FL, et al.,. Phage-antibiotic combination is a superior treatment against Acinetobacter baumannii in a preclinical studyEBioMedicine 2022; 80:104045
DOI: 10.1016/j.ebiom.2022.104045 · [Download PDF]
- Landry, SA, et al.,. Fit-tested N95 masks combined with portable HEPA filtration can protect against high aerosolized viral loads over prolonged periods at close rangeThe Journal of Infectious Diseases 2022; 226(2):199-207
DOI: 10.1093/infdis/jiac195 · [Download PDF]
- Bhusal, RP, Barr, JJ & Subedi, D. A metabolic perspective into antimicrobial tolerance and resistanceThe Lancet Microbe 2022; 3(3):e160-161
DOI: 10.1016/S2666-5247(22)00006-4 · [Download PDF]
- Lee, CZ, et al.,. The gut virome in two indigenous populations from MalaysiaScientific Reports 2022; 12(1):1824
DOI: 10.1038/s41598-022-05656-3 · [Download PDF]
- Han, ML, et al.,. Comparative metabolomics revealed key pathways associated with the synergistic killing of multidrug-resistant Klebsiella pneumoniae by a bacteriophage-polymyxin combinationComputational and Structural Biotechnology Journal 2022; 20:485-495
DOI: 10.1016/j.csbj.2021.12.039 · [Download PDF]
- Bichet, MC, Patwa, R & Barr, J.J.. Protocols for studying bacteriophage interactions with in vitro epithelial cell layersSTAR Protocols 2021; 2(3):100697
DOI: 10.1016/j.xpro.2021.100697 · [Download PDF]
- Thing, TY, et al.,. Component parts of bacteriophage virions accurately defined by a machine-learning approach built on evolutionary featuresmSystems 2021; 6(3):e00242-21
DOI: 10.1128/mSystems.00242-21 · [Download PDF]
- Landry, SA. et al.,. Viable virus aerosol propagation by positive airway pressure circuit leak and mitigation with a ventilated patient hoodEuropean Respiratory Journal 2021; 57(6)
DOI: 10.1183/13993003.03666-2020 · [Download PDF]
- Hossain, L. et al.,. Engineering laminated paper for SARS-CoV-2 medical gownsPolymer 2021; 222:123643
DOI: 10.1016/j.polymer.2021.123643 · [Download PDF]
- Gordillo Altamirano, FL., et al.,. Screening for lysogen activity in therapeutically relevant bacteriophagesBio-protocol 2021; 11(8):e3998
DOI: 10.21769/BioProtoc.3997 · [Download PDF]
- Gordillo Altamirano, FL & Barr JJ. Unlocking the next generation of phage therapy: the key is in the receptorsCurrent Opinions in Biotechnology 2021; 68
DOI: 10.1016/j.copbio.2020.10.002 · [Download PDF]
- Dahlman, S, et al.,. Phages to shape the gut microbiota?Current Opinions in Biotechnology 2021; 68
DOI: 10.1016/j.copbio.2020.09.016 · [Download PDF]
- Bichet, M, et al.,. Bacteriophage uptake by mammalian cell layers represents a potential sink that may impact phage therapyiScience 2021;
DOI: 10.1016/j.isci.2021.102287
- Wahida, A, Tang, F & Barr, JJ. Rethinking phage-bacteria-eukaryotic relationships and their influence on human healthCell Host & Microbe 2021;
DOI: 10.1016/j.chom.2021.02.007 · [Download PDF]
- Subedi, D & Barr, JJ. Temporal Stability and Genetic Diversity of 48-Year-Old T-Series PhagesmSystems 2021; 6(1)
DOI: 10.1128/mSystems.00990-20 · [Download PDF]
- Gordillo Altamirano, FL, et al.,. Bacteriophage-resistant Acinetobacter baumannii are resensitized to antimicrobialsNature Microbiology 2021;
DOI: 10.1038/s41564-020-00830-7 · [Download PDF]
- Sant, D, et al.,. Host diversity slows bacteriophage adaptation by selecting generalists over specialistsNature Ecology & Evolution 2021;
DOI: 10.1038/s41559-020-01364-1 · [Download PDF]
- Lin, YW, et al.,. Pharmacokinetics/pharmacodynamics of antipseudomonal bacteriophage therapy in rats: a proof-of-concept studyClinical Microbiology and Infection 2020;
DOI: 10.1016/j.cmi.2020.04.039 · [Download PDF]
- Landry, SA, et al.,. Viable virus aerosol propagation by positive airway pressure (PAP) circuit leak and mitigation with a ventilated patient hoodEuropean Respiratory Journal 2020;
DOI: 10.1183/13993003.03666-2020
- Barr, JJ. Precision engineers: bacteriophages modulate the gut microbiome and metabolomeCell Host & Microbe 2019; 25(6)
DOI: 10.1016/j.chom.2019.05.010 · [Download PDF]
- Joiner et al.,. Impact of bacteria motility in the encounter rates with bacteriophage in mucusScientific Reports 2019; 9(1)
DOI: 10.1038/s41598-019-52794-2 · [Download PDF]
- Ghose C, et al.,. The Virome of Cerebrospinal Fluid: Viruses Where We Once Thought There Were NoneFrontiers in Microbiology 2019;
DOI: 10.3389/fmicb.2019.02061 · [Download PDF]
- Edwards RA, et al.,. Global phylogeography and ancient evolution of the widespread human gut virus crAssphageNature Microbiology 2019;
DOI: 10.1038/s41564-019-0494-6
- Barr JJ. Missing a Phage: Unraveling tripartite symbioses within the human gutmSystems 2019; 4(3)
DOI: 10.1128/mSystems.00105-19 · [Download PDF]
- Chin WH, Barr JJ. Phage research in 'organ-on-chip' devicesMicrobiology Australia 2019; 40(1)
DOI: 10.1071/MA19006 · [Download PDF]
- Gordillo Altamirano FL, Barr JJ. Phage therapy in the postantibiotic eraClinical Microbiology Reviews 2019; 32(2)
DOI: 10.1128/CMR.00066-18 · [Download PDF]
- Van Belleghem JD, Dabrowska K, Vaneechoutee M, Barr JJ, Bollyky PL. Interactions between Bacteriophage, Bacteria, and the Mammalian Immune SystemViruses 2019; 11(10)
DOI: doi:10.3390/v11010010 · [Download PDF]
- Barr JJ. A bacteriophage journey through the human bodyImmunological Reviews 2017; 279(1):106-122
DOI: 10.1111/imr.12565 · [Download PDF]
- Nguyen S, Baker K, Padman BS, Patwa R, Dunstan RA, Weston TA, Schlosser K, Bailey B, Lithgow T, Lazarou M, Luque A, Rohwer F, Blumberg RS, Barr JJ. Bacteriophage transcytosis provides mechanism to cross epithelial cell layersmBio 2017; 8(6)
DOI: 10.1128/mBio.01874-17 · [Download PDF]
- Schooley RT, Biswas B, Gill JJ, Hernandez-Morales A, Lancaster J, Lessor L, Barr JJ, Reed SL, Rohwer F, Benler S, Segall AM, Taplitz R, Smith DM, Kerr K, Kumaraswamy M, Nizet V, Lin L, McCauley MD, Strathdee SA, Benson CA, Pope RK, Leroux BM, Picel AC, Mateczun AJ, Cilwa KE, Regeimbal JM, Estrella LA, Wolfe DM, Henry MS, Quinones J, Salka S, Bishop-Lilly KA, Young R, Hamilton T. Development and use of personalized bacteriophage-based therapeutic cocktails to treat a patient with a disseminated resistant Acinetobacter baumannii infectionAntimicrobial Agent. Chemotherapy. 2017; 61(10)
DOI: 10.1128/AAC.00954-17 · [Download PDF]
- Quistad SD, Grasis JA, Barr JJ, Rohwer FL. Viruses and the origin of microbiome selection and immunity.ISME J. 2016;
DOI: 10.1038/ismej.2016.182
- Natasha Bonilla, Maria Isabel Rojas, Giuliano Netto Flores Cruz, Shr-Hau Hung, Forest Rohwer, Jeremy J. Barr. Phage on tap–a quick and efficient protocol for the preparation of bacteriophage laboratory stocksPeerJ 2016;
PMID: 27547567 · [Download PDF]
- Barr JJ, Dutilh BE, Skennerton CT, Fukushima T, Hastie ML, Gorman JJ, Tyson GW, Bond PL. Metagenomic and metaproteomic analyses of Accumulibacter phosphatis-enriched floccular and granular biofilm.Environ. Microbiol. 2016; 18(1):273-87
PMID: 26279094
- Barr JJ, Auro R, Sam-Soon N, Kassegne S, Peters G, Bonilla N, Hatay M, Mourtada S, Bailey B, Youle M, Felts B, Baljon A, Nulton J, Salamon P, Rohwer F. Subdiffusive motion of bacteriophage in mucosal surfaces increases the frequency of bacterial encounters.Proc. Natl. Acad. Sci. U.S.A. 2015; 112(44):13675-80
PMID: 26483471 · [Download PDF]
- Skennerton CT, Barr JJ, Slater FR, Bond PL, Tyson GW. Expanding our view of genomic diversity in Candidatus Accumulibacter clades.Environ. Microbiol. 2015; 17(5):1574-85
PMID: 25088527
- Tariq MA, Everest FL, Cowley LA, De Soyza A, Holt GS, Bridge SH, Perry A, Perry JD, Bourke SJ, Cummings SP, Lanyon CV, Barr JJ, Smith DL. A metagenomic approach to characterize temperate bacteriophage populations from Cystic Fibrosis and non-Cystic Fibrosis bronchiectasis patients.Front Microbiol 2015; 6:97
PMID: 25741327
- Dutilh BE, Cassman N, McNair K, Sanchez SE, Silva GG, Boling L, Barr JJ, Speth DR, Seguritan V, Aziz RK, Felts B, Dinsdale EA, Mokili JL, Edwards RA. A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes.Nat Commun 2014; 5:4498
PMID: 25058116
- Barr JJ, Youle M, Rohwer F. Innate and acquired bacteriophage-mediated immunity.Bacteriophage 2013; 3(3):e25857
PMID: 24228227 · [Download PDF]
- Barr JJ, Auro R, Furlan M, Whiteson KL, Erb ML, Pogliano J, Stotland A, Wolkowicz R, Cutting AS, Doran KS, Salamon P, Youle M, Rohwer F. Bacteriophage adhering to mucus provide a non-host-derived immunity.Proc. Natl. Acad. Sci. U.S.A. 2013; 110(26):10771-6
PMID: 23690590 · [Download PDF]
- Slater FR, Singer AC, Turner S, Barr JJ, Bond PL. Pandemic pharmaceutical dosing effects on wastewater treatment: no adaptation of activated sludge bacteria to degrade the antiviral drug oseltamivir (Tamiflu®) and loss of nutrient removal performance.FEMS Microbiol. Lett. 2011; 315(1):17-22
PMID: 21133989
- Barr JJ, Slater FR, Fukushima T, Bond PL. Evidence for bacteriophage activity causing community and performance changes in a phosphorus-removal activated sludge.FEMS Microbiol. Ecol. 2010; 74(3):631-42
PMID: 20883494
- Barr JJ, Cook AE, Bond PL. Granule formation mechanisms within an aerobic wastewater system for phosphorus removal.Appl. Environ. Microbiol. 2010; 76(22):7588-97
PMID: 20851963
- Barr JJ, Blackall LL, Bond P. Further limitations of phylogenetic group-specific probes used for detection of bacteria in environmental samples.ISME J 2010; 4(8):959-61
PMID: 20357832
